STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arad_8319Sugar ABC transporter; Belongs to the ABC transporter superfamily. (363 aa)    
Predicted Functional Partners:
thuF-2
Trehalosemaltose ABC transporter.
  
  0.919
thuG
Trehalosemaltose ABC transporter.
  0.912
thuF
Trehalosemaltose ABC transporter.
  
  0.908
smoF
Sorbitol/mannitol ABC transporter.
  
  0.900
smoG
Sorbitol/mannitol ABC transporter.
 
 0.889
Arad_8314
Sugar ABC transporter.
 
   0.874
Arad_8316
Sugar ABC transporter.
 
   0.863
smoEch
Sorbitol/mannitol ABC transporter.
   
  0.844
thuE
Trehalosemaltose ABC transporter.
   
  0.844
Arad_8317
Alpha-galactosidase.
  
    0.799
Your Current Organism:
Agrobacterium radiobacter
NCBI taxonomy Id: 311403
Other names: A. radiobacter K84, Agrobacterium radiobacter K84, Agrobacterium radiobacter str. K84, Agrobacterium radiobacter strain K84, Agrobacterium rhizogenes K84, Agrobacterium tumefaciens K84, Rhizobium radiobacter K84
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.