STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glxBAmidophosphoribosyl transferase protein. (302 aa)    
Predicted Functional Partners:
glxC
Formyl-methanofuran dehydrogenase domain 3 protein.
 
  0.997
glxD
Glutamate synthase large subunit 2 protein; Belongs to the glutamate synthase family.
 
 0.996
soxBe-2
Sarcosine oxidase beta subunit protein.
 
  
  0.951
soxDe-2
Sarcosine oxidase delta subunit protein.
 
  
  0.940
soxAe
Sarcosine oxidase alpha subunit protein.
 
  
 0.932
soxBe
Sarcosine oxidase beta subunit protein.
 
  
  0.927
gltB
Glutamate synthase large subunit protein.
  
 
 0.911
soxDe
Sarcosine oxidase delta subunit protein.
    
  0.906
Arad_8360
Transcriptional regulator protein.
 
     0.897
glnT
Glutamine synthetase III protein.
 
  
 0.897
Your Current Organism:
Agrobacterium radiobacter
NCBI taxonomy Id: 311403
Other names: A. radiobacter K84, Agrobacterium radiobacter K84, Agrobacterium radiobacter str. K84, Agrobacterium radiobacter strain K84, Agrobacterium rhizogenes K84, Agrobacterium tumefaciens K84, Rhizobium radiobacter K84
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