Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Arad_8157 | Arad_8689 | Arad_8157 | Arad_8689 | Monooxygenase protein. | FMNH2-dependent monooxygenase protein. | 0.689 |
Arad_8157 | Arad_8690 | Arad_8157 | Arad_8690 | Monooxygenase protein. | FMNH2-dependent monooxygenase protein. | 0.701 |
Arad_8157 | ssuD | Arad_8157 | Arad_2722 | Monooxygenase protein. | Alkanesulfonate monooxygenase protein; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family. | 0.513 |
Arad_8684 | Arad_8688 | Arad_8684 | Arad_8688 | Amino acid ABC transporter. | Amino acid ABC transporter. | 0.998 |
Arad_8684 | Arad_8689 | Arad_8684 | Arad_8689 | Amino acid ABC transporter. | FMNH2-dependent monooxygenase protein. | 0.758 |
Arad_8684 | Arad_8690 | Arad_8684 | Arad_8690 | Amino acid ABC transporter. | FMNH2-dependent monooxygenase protein. | 0.730 |
Arad_8684 | Arad_8691 | Arad_8684 | Arad_8691 | Amino acid ABC transporter. | Monooxygenase protein. | 0.655 |
Arad_8684 | metN-2 | Arad_8684 | Arad_8686 | Amino acid ABC transporter. | Amino acid ABC transporter; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.998 |
Arad_8688 | Arad_8684 | Arad_8688 | Arad_8684 | Amino acid ABC transporter. | Amino acid ABC transporter. | 0.998 |
Arad_8688 | Arad_8689 | Arad_8688 | Arad_8689 | Amino acid ABC transporter. | FMNH2-dependent monooxygenase protein. | 0.748 |
Arad_8688 | Arad_8690 | Arad_8688 | Arad_8690 | Amino acid ABC transporter. | FMNH2-dependent monooxygenase protein. | 0.720 |
Arad_8688 | Arad_8691 | Arad_8688 | Arad_8691 | Amino acid ABC transporter. | Monooxygenase protein. | 0.656 |
Arad_8688 | metN-2 | Arad_8688 | Arad_8686 | Amino acid ABC transporter. | Amino acid ABC transporter; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.998 |
Arad_8689 | Arad_8157 | Arad_8689 | Arad_8157 | FMNH2-dependent monooxygenase protein. | Monooxygenase protein. | 0.689 |
Arad_8689 | Arad_8684 | Arad_8689 | Arad_8684 | FMNH2-dependent monooxygenase protein. | Amino acid ABC transporter. | 0.758 |
Arad_8689 | Arad_8688 | Arad_8689 | Arad_8688 | FMNH2-dependent monooxygenase protein. | Amino acid ABC transporter. | 0.748 |
Arad_8689 | Arad_8690 | Arad_8689 | Arad_8690 | FMNH2-dependent monooxygenase protein. | FMNH2-dependent monooxygenase protein. | 0.749 |
Arad_8689 | Arad_8691 | Arad_8689 | Arad_8691 | FMNH2-dependent monooxygenase protein. | Monooxygenase protein. | 0.893 |
Arad_8689 | Arad_9062 | Arad_8689 | Arad_9062 | FMNH2-dependent monooxygenase protein. | Monooxygenase protein. | 0.661 |
Arad_8689 | fadB2 | Arad_8689 | Arad_0816 | FMNH2-dependent monooxygenase protein. | enoyl-CoA hydratase protein. | 0.764 |
page 1 of 3