STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arad_9131Methyltransferase, FkbM family. (314 aa)    
Predicted Functional Partners:
Arad_9130
Glycosyltransferase protein.
 
   
 0.862
Arad_9129
Hypothetical protein.
       0.676
Arad_9518
Conserved hypothetical protein.
  
     0.664
pssN
Exopolysaccharide export protein.
       0.633
Arad_7635
Non-ribosomal peptide synthetase.
 
   
 0.556
glxA-2
Transcriptional regulator protein.
       0.498
vbsS-2
Vicibactin biosynthesis non-ribosomal peptide synthase protein; Belongs to the ATP-dependent AMP-binding enzyme family.
     
 0.475
Arad_9144
Capsular polysaccharide export inner-membrane protein.
 
     0.426
Arad_1840
Acyl CoA-acyl carrier protein transacylase.
  
  
 0.419
Arad_9127
Two-component sensor histidine kinase protein.
       0.416
Your Current Organism:
Agrobacterium radiobacter
NCBI taxonomy Id: 311403
Other names: A. radiobacter K84, Agrobacterium radiobacter K84, Agrobacterium radiobacter str. K84, Agrobacterium radiobacter strain K84, Agrobacterium rhizogenes K84, Agrobacterium tumefaciens K84, Rhizobium radiobacter K84
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.