Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Arad_1026 | Arad_9197 | Conserved hypothetical protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | Methyltransferase protein. | 0.414 |
Arad_1840 | Arad_7635 | Acyl CoA-acyl carrier protein transacylase. | Non-ribosomal peptide synthetase. | 0.995 |
Arad_1840 | Arad_9197 | Acyl CoA-acyl carrier protein transacylase. | Methyltransferase protein. | 0.496 |
Arad_2188 | Arad_9197 | NADH-ubiquinone oxidoreductase protein. | Methyltransferase protein. | 0.569 |
Arad_7635 | Arad_1840 | Non-ribosomal peptide synthetase. | Acyl CoA-acyl carrier protein transacylase. | 0.995 |
Arad_7635 | Arad_9197 | Non-ribosomal peptide synthetase. | Methyltransferase protein. | 0.534 |
Arad_9196 | Arad_9197 | Transcriptional regulator protein. | Methyltransferase protein. | 0.526 |
Arad_9197 | Arad_1026 | Methyltransferase protein. | Conserved hypothetical protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | 0.414 |
Arad_9197 | Arad_1840 | Methyltransferase protein. | Acyl CoA-acyl carrier protein transacylase. | 0.496 |
Arad_9197 | Arad_2188 | Methyltransferase protein. | NADH-ubiquinone oxidoreductase protein. | 0.569 |
Arad_9197 | Arad_7635 | Methyltransferase protein. | Non-ribosomal peptide synthetase. | 0.534 |
Arad_9197 | Arad_9196 | Methyltransferase protein. | Transcriptional regulator protein. | 0.526 |