STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
eryCIIIDesosaminyl transferase EryCIII precursor. (430 aa)    
Predicted Functional Partners:
pksL
Polyketide synthase PksL.
  
  
 0.722
thcB
Cytochrome P450 116.
  
 0.578
bioI_1
Biotin biosynthesis cytochrome P450.
  
 0.547
CTQ66066.1
Cytochrome P450 107B1.
  
 0.547
bioI_2
Biotin biosynthesis cytochrome P450.
  
 0.547
bioI_3
Biotin biosynthesis cytochrome P450.
  
 0.547
CTQ76630.1
Cytochrome P450-pinF2, plant-inducible.
  
 0.547
CTQ78675.1
Cytochrome P450 107B1.
  
 0.547
CTQ66298.1
Secondary thiamine-phosphate synthase enzyme.
       0.540
gltA_1
Glutamate synthase [NADPH] large chain; Belongs to the glutamate synthase family.
       0.509
Your Current Organism:
Labrenzia alba
NCBI taxonomy Id: 311410
Other names: CECT 5095, CIP 108402, DSM 18380, L. alba, Labrenzia alba (Pujalte et al. 2006) Biebl et al. 2007, Stappia alba, Stappia alba Pujalte et al. 2006, strain 5OM6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.