STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTQ68488.1Putative domain protein. (391 aa)    
Predicted Functional Partners:
CTQ68491.1
Hypothetical protein.
 
  
 0.966
cyaB_3
Adenylate cyclase 2.
 
   
 0.871
CTQ68494.1
Hypothetical protein.
 
     0.635
ybhF_2
Putative ABC transporter ATP-binding protein YbhF.
  
  
 0.508
ybhS
Inner membrane transport permease YbhS.
  
  
 0.493
yadH
Inner membrane transport permease YadH.
  
  
 0.493
yhhJ
Inner membrane transport permease YhhJ.
  
  
 0.493
ybhR
Inner membrane transport permease YbhR.
  
  
 0.493
CTQ65832.1
Putative NAD(P)H nitroreductase.
  
  
 0.490
ydjA
Putative NAD(P)H nitroreductase YdjA.
  
  
 0.490
Your Current Organism:
Labrenzia alba
NCBI taxonomy Id: 311410
Other names: CECT 5095, CIP 108402, DSM 18380, L. alba, Labrenzia alba (Pujalte et al. 2006) Biebl et al. 2007, Stappia alba, Stappia alba Pujalte et al. 2006, strain 5OM6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.