STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTQ73757.1PAS domain protein. (214 aa)    
Predicted Functional Partners:
CTQ73764.1
Putative glycosyltransferase.
 
     0.744
CTQ69235.1
Flagellar export protein FliJ.
  
     0.743
CTQ74938.1
Flagellar hook-associated protein FlgL.
  
    0.738
CTQ64628.1
Hypothetical protein.
  
     0.732
CTQ74917.1
Hypothetical protein.
  
     0.730
CTQ74004.1
Hypothetical protein.
  
     0.724
CTQ74281.1
Twin-arg-translocated uncharacterized repeat protein.
  
     0.723
CTQ74941.1
Flagellar hook-associated protein FlgK; Belongs to the flagella basal body rod proteins family.
  
    0.720
CTQ73783.1
Hypothetical protein.
  
     0.713
CTQ74020.1
Putative periplasmic ligand-binding sensor domain protein.
  
     0.712
Your Current Organism:
Labrenzia alba
NCBI taxonomy Id: 311410
Other names: CECT 5095, CIP 108402, DSM 18380, L. alba, Labrenzia alba (Pujalte et al. 2006) Biebl et al. 2007, Stappia alba, Stappia alba Pujalte et al. 2006, strain 5OM6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.