Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CTQ66259.1 | CTQ74190.1 | LA5095_00790 | LA5095_03000 | Hypothetical protein. | Putative MFS family transporter protein. | 0.433 |
CTQ74190.1 | CTQ66259.1 | LA5095_03000 | LA5095_00790 | Putative MFS family transporter protein. | Hypothetical protein. | 0.433 |
CTQ74190.1 | aas | LA5095_03000 | LA5095_02667 | Putative MFS family transporter protein. | Bifunctional protein aas. | 0.408 |
CTQ74190.1 | metH_1 | LA5095_03000 | LA5095_03066 | Putative MFS family transporter protein. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.471 |
CTQ74190.1 | pabB | LA5095_03000 | LA5095_05109 | Putative MFS family transporter protein. | Para-aminobenzoate synthase component 1. | 0.429 |
CTQ74190.1 | pksL | LA5095_03000 | LA5095_00749 | Putative MFS family transporter protein. | Polyketide synthase PksL. | 0.444 |
CTQ74190.1 | trpE | LA5095_03000 | LA5095_04205 | Putative MFS family transporter protein. | Anthranilate synthase component 1. | 0.562 |
aas | CTQ74190.1 | LA5095_02667 | LA5095_03000 | Bifunctional protein aas. | Putative MFS family transporter protein. | 0.408 |
aas | pabB | LA5095_02667 | LA5095_05109 | Bifunctional protein aas. | Para-aminobenzoate synthase component 1. | 0.695 |
aas | pksL | LA5095_02667 | LA5095_00749 | Bifunctional protein aas. | Polyketide synthase PksL. | 0.999 |
aas | trpE | LA5095_02667 | LA5095_04205 | Bifunctional protein aas. | Anthranilate synthase component 1. | 0.592 |
metH_1 | CTQ74190.1 | LA5095_03066 | LA5095_03000 | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Putative MFS family transporter protein. | 0.471 |
metH_1 | pabB | LA5095_03066 | LA5095_05109 | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Para-aminobenzoate synthase component 1. | 0.790 |
metH_1 | pksL | LA5095_03066 | LA5095_00749 | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Polyketide synthase PksL. | 0.812 |
pabB | CTQ74190.1 | LA5095_05109 | LA5095_03000 | Para-aminobenzoate synthase component 1. | Putative MFS family transporter protein. | 0.429 |
pabB | aas | LA5095_05109 | LA5095_02667 | Para-aminobenzoate synthase component 1. | Bifunctional protein aas. | 0.695 |
pabB | metH_1 | LA5095_05109 | LA5095_03066 | Para-aminobenzoate synthase component 1. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.790 |
pabB | pksL | LA5095_05109 | LA5095_00749 | Para-aminobenzoate synthase component 1. | Polyketide synthase PksL. | 0.974 |
pabB | trpE | LA5095_05109 | LA5095_04205 | Para-aminobenzoate synthase component 1. | Anthranilate synthase component 1. | 0.999 |
pksL | CTQ74190.1 | LA5095_00749 | LA5095_03000 | Polyketide synthase PksL. | Putative MFS family transporter protein. | 0.444 |
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