STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mcp3Methyl-accepting chemotaxis protein 3. (667 aa)    
Predicted Functional Partners:
cheA
Chemotaxis protein CheA.
 
 0.996
cph2_8
Bacteriophytochrome cph2.
 
 0.976
cheW
Coupling protein CheW.
 
 0.966
cheR
Chemotaxis protein methyltransferase.
 
 0.958
cheB
Chemotaxis response regulator protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
 0.958
cheY_1
Chemotaxis protein CheY.
 
  
  0.803
rpfC_1
Sensory/regulatory protein RpfC.
  
 0.790
arcB_1
Aerobic respiration control sensor protein ArcB.
  
 0.789
yegE_1
Putative diguanylate cyclase YegE.
 
 0.785
yegE_2
Putative diguanylate cyclase YegE.
 
 0.785
Your Current Organism:
Labrenzia alba
NCBI taxonomy Id: 311410
Other names: CECT 5095, CIP 108402, DSM 18380, L. alba, Labrenzia alba (Pujalte et al. 2006) Biebl et al. 2007, Stappia alba, Stappia alba Pujalte et al. 2006, strain 5OM6
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