Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CTQ77396.1 | CTQ77400.1 | LA5095_03940 | LA5095_03941 | Hypothetical protein. | Putative NUDIX hydrolase. | 0.812 |
CTQ77396.1 | CTQ77404.1 | LA5095_03940 | LA5095_03942 | Hypothetical protein. | Hypothetical protein. | 0.665 |
CTQ77396.1 | cca | LA5095_03940 | LA5095_03939 | Hypothetical protein. | CCA-adding enzyme. | 0.808 |
CTQ77400.1 | CTQ77396.1 | LA5095_03941 | LA5095_03940 | Putative NUDIX hydrolase. | Hypothetical protein. | 0.812 |
CTQ77400.1 | CTQ77404.1 | LA5095_03941 | LA5095_03942 | Putative NUDIX hydrolase. | Hypothetical protein. | 0.718 |
CTQ77400.1 | cca | LA5095_03941 | LA5095_03939 | Putative NUDIX hydrolase. | CCA-adding enzyme. | 0.886 |
CTQ77400.1 | dbpA | LA5095_03941 | LA5095_00469 | Putative NUDIX hydrolase. | ATP-dependent RNA helicase DbpA; Belongs to the DEAD box helicase family. | 0.700 |
CTQ77400.1 | nadE | LA5095_03941 | LA5095_04372 | Putative NUDIX hydrolase. | Glutamine-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.709 |
CTQ77400.1 | nnr | LA5095_03941 | LA5095_05648 | Putative NUDIX hydrolase. | Nicotinamide nucleotide repair protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the [...] | 0.972 |
CTQ77400.1 | pksL | LA5095_03941 | LA5095_00749 | Putative NUDIX hydrolase. | Polyketide synthase PksL. | 0.734 |
CTQ77400.1 | rhlE_1 | LA5095_03941 | LA5095_00254 | Putative NUDIX hydrolase. | ATP-dependent RNA helicase RhlE. | 0.700 |
CTQ77400.1 | ribBA | LA5095_03941 | LA5095_00311 | Putative NUDIX hydrolase. | Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.795 |
CTQ77400.1 | rnr | LA5095_03941 | LA5095_04229 | Putative NUDIX hydrolase. | Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. | 0.711 |
CTQ77404.1 | CTQ77396.1 | LA5095_03942 | LA5095_03940 | Hypothetical protein. | Hypothetical protein. | 0.665 |
CTQ77404.1 | CTQ77400.1 | LA5095_03942 | LA5095_03941 | Hypothetical protein. | Putative NUDIX hydrolase. | 0.718 |
CTQ77404.1 | cca | LA5095_03942 | LA5095_03939 | Hypothetical protein. | CCA-adding enzyme. | 0.717 |
cca | CTQ77396.1 | LA5095_03939 | LA5095_03940 | CCA-adding enzyme. | Hypothetical protein. | 0.808 |
cca | CTQ77400.1 | LA5095_03939 | LA5095_03941 | CCA-adding enzyme. | Putative NUDIX hydrolase. | 0.886 |
cca | CTQ77404.1 | LA5095_03939 | LA5095_03942 | CCA-adding enzyme. | Hypothetical protein. | 0.717 |
cca | nnr | LA5095_03939 | LA5095_05648 | CCA-adding enzyme. | Nicotinamide nucleotide repair protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the [...] | 0.431 |
page 1 of 3