STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTQ78479.1Hypothetical protein. (162 aa)    
Predicted Functional Partners:
cysS
Cysteine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.800
CTQ67585.1
Hypothetical protein.
  
     0.743
CTQ79354.1
Hypothetical protein.
  
     0.739
CTQ69882.1
Hypothetical protein.
 
     0.705
CTQ67090.1
Hypothetical protein.
  
     0.692
leuA_2
2-isopropylmalate synthase; Belongs to the alpha-IPM synthase/homocitrate synthase family.
       0.658
CTQ80427.1
Hypothetical protein.
 
     0.636
CTQ78474.1
Putative chloramphenical resistance permease RarD.
       0.590
flhA_1
S-(hydroxymethyl)glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
    
 0.550
flhA_3
S-(hydroxymethyl)glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
    
 0.550
Your Current Organism:
Labrenzia alba
NCBI taxonomy Id: 311410
Other names: CECT 5095, CIP 108402, DSM 18380, L. alba, Labrenzia alba (Pujalte et al. 2006) Biebl et al. 2007, Stappia alba, Stappia alba Pujalte et al. 2006, strain 5OM6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.