Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CTQ66741.1 | CTQ66761.1 | LA5095_00942 | LA5095_00948 | Cytochrome c, mono-and diheme variants. | Cytochrome c2. | 0.999 |
CTQ66741.1 | CTQ73735.1 | LA5095_00942 | LA5095_02866 | Cytochrome c, mono-and diheme variants. | Quinol dehydrogenase periplasmic component. | 0.629 |
CTQ66741.1 | CTQ79946.1 | LA5095_00942 | LA5095_05175 | Cytochrome c, mono-and diheme variants. | DMSO reductase anchor subunit (DmsC). | 0.886 |
CTQ66741.1 | fdhB1 | LA5095_00942 | LA5095_01463 | Cytochrome c, mono-and diheme variants. | Formate dehydrogenase iron-sulfur subunit. | 0.860 |
CTQ66741.1 | psrA | LA5095_00942 | LA5095_05173 | Cytochrome c, mono-and diheme variants. | Sulfur reductase chain A; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.912 |
CTQ66741.1 | sir | LA5095_00942 | LA5095_04944 | Cytochrome c, mono-and diheme variants. | Sulfite reductase [ferredoxin]. | 0.723 |
CTQ66741.1 | ttrB | LA5095_00942 | LA5095_05174 | Cytochrome c, mono-and diheme variants. | Tetrathionate reductase electron transport protein. | 0.860 |
CTQ66761.1 | CTQ66741.1 | LA5095_00948 | LA5095_00942 | Cytochrome c2. | Cytochrome c, mono-and diheme variants. | 0.999 |
CTQ66761.1 | CTQ68709.1 | LA5095_00948 | LA5095_01469 | Cytochrome c2. | NADH-plastoquinone oxidoreductase subunit. | 0.479 |
CTQ66761.1 | CTQ73735.1 | LA5095_00948 | LA5095_02866 | Cytochrome c2. | Quinol dehydrogenase periplasmic component. | 0.956 |
CTQ66761.1 | CTQ79946.1 | LA5095_00948 | LA5095_05175 | Cytochrome c2. | DMSO reductase anchor subunit (DmsC). | 0.864 |
CTQ66761.1 | fdhB1 | LA5095_00948 | LA5095_01463 | Cytochrome c2. | Formate dehydrogenase iron-sulfur subunit. | 0.888 |
CTQ66761.1 | psrA | LA5095_00948 | LA5095_05173 | Cytochrome c2. | Sulfur reductase chain A; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.930 |
CTQ66761.1 | sir | LA5095_00948 | LA5095_04944 | Cytochrome c2. | Sulfite reductase [ferredoxin]. | 0.630 |
CTQ66761.1 | ttrB | LA5095_00948 | LA5095_05174 | Cytochrome c2. | Tetrathionate reductase electron transport protein. | 0.888 |
CTQ68709.1 | CTQ66761.1 | LA5095_01469 | LA5095_00948 | NADH-plastoquinone oxidoreductase subunit. | Cytochrome c2. | 0.479 |
CTQ68709.1 | CTQ73735.1 | LA5095_01469 | LA5095_02866 | NADH-plastoquinone oxidoreductase subunit. | Quinol dehydrogenase periplasmic component. | 0.897 |
CTQ68709.1 | CTQ79946.1 | LA5095_01469 | LA5095_05175 | NADH-plastoquinone oxidoreductase subunit. | DMSO reductase anchor subunit (DmsC). | 0.549 |
CTQ68709.1 | fdhB1 | LA5095_01469 | LA5095_01463 | NADH-plastoquinone oxidoreductase subunit. | Formate dehydrogenase iron-sulfur subunit. | 0.971 |
CTQ68709.1 | napB | LA5095_01469 | LA5095_02868 | NADH-plastoquinone oxidoreductase subunit. | Diheme cytochrome c NapB; Electron transfer subunit of the periplasmic nitrate reductase complex NapAB; Belongs to the NapB family. | 0.714 |
page 1 of 4