STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTQ80119.1Xanthine dehydrogenase accessory protein XdhC. (336 aa)    
Predicted Functional Partners:
pucD
Putative xanthine dehydrogenase subunit D.
 
 
 0.999
cdhC
Caffeine dehydrogenase subunit gamma.
 
 
 0.997
coxM_1
Carbon monoxide dehydrogenase medium chain.
 
 
 0.933
pucM_4
5-hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
 
     0.915
guaD
Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.
 
 
  0.906
mocA
Molybdenum cofactor cytidylyltransferase.
 
 
 0.891
coxM_2
Carbon monoxide dehydrogenase medium chain.
 
 
 0.849
ndhL
Nicotinate dehydrogenase large molybdopterin subunit.
 
 
 0.844
CTQ78144.1
8-oxoguanine deaminase.
 
 
  0.836
ndhM
Nicotinate dehydrogenase medium molybdopterin subunit.
 
 
 0.828
Your Current Organism:
Labrenzia alba
NCBI taxonomy Id: 311410
Other names: CECT 5095, CIP 108402, DSM 18380, L. alba, Labrenzia alba (Pujalte et al. 2006) Biebl et al. 2007, Stappia alba, Stappia alba Pujalte et al. 2006, strain 5OM6
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