Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CTQ80371.1 | siaT_11 | LA5095_05605 | LA5095_00927 | 2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM. | Neu5Ac permease. | 0.787 |
CTQ80371.1 | siaT_13 | LA5095_05605 | LA5095_01122 | 2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM. | Neu5Ac permease. | 0.674 |
CTQ80371.1 | siaT_14 | LA5095_05605 | LA5095_01140 | 2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM. | Neu5Ac permease. | 0.773 |
CTQ80371.1 | siaT_35 | LA5095_05605 | LA5095_03717 | 2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM. | Neu5Ac permease. | 0.820 |
CTQ80371.1 | siaT_36 | LA5095_05605 | LA5095_03718 | 2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM. | Neu5Ac permease. | 0.663 |
CTQ80371.1 | siaT_37 | LA5095_05605 | LA5095_03743 | 2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM. | Neu5Ac permease. | 0.814 |
CTQ80371.1 | siaT_45 | LA5095_05605 | LA5095_05604 | 2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM. | Neu5Ac permease. | 0.955 |
CTQ80371.1 | siaT_51 | LA5095_05605 | LA5095_06237 | 2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM. | Neu5Ac permease. | 0.786 |
CTQ80371.1 | siaT_7 | LA5095_05605 | LA5095_00603 | 2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM. | Neu5Ac permease. | 0.769 |
CTQ80371.1 | yiaO_13 | LA5095_05605 | LA5095_05606 | 2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM. | Extracytoplasmic solute receptor protein YiaO. | 0.907 |
siaT_11 | CTQ80371.1 | LA5095_00927 | LA5095_05605 | Neu5Ac permease. | 2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM. | 0.787 |
siaT_11 | siaT_13 | LA5095_00927 | LA5095_01122 | Neu5Ac permease. | Neu5Ac permease. | 0.475 |
siaT_11 | siaT_36 | LA5095_00927 | LA5095_03718 | Neu5Ac permease. | Neu5Ac permease. | 0.864 |
siaT_11 | yiaO_13 | LA5095_00927 | LA5095_05606 | Neu5Ac permease. | Extracytoplasmic solute receptor protein YiaO. | 0.809 |
siaT_13 | CTQ80371.1 | LA5095_01122 | LA5095_05605 | Neu5Ac permease. | 2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM. | 0.674 |
siaT_13 | siaT_11 | LA5095_01122 | LA5095_00927 | Neu5Ac permease. | Neu5Ac permease. | 0.475 |
siaT_13 | siaT_14 | LA5095_01122 | LA5095_01140 | Neu5Ac permease. | Neu5Ac permease. | 0.510 |
siaT_13 | siaT_35 | LA5095_01122 | LA5095_03717 | Neu5Ac permease. | Neu5Ac permease. | 0.479 |
siaT_13 | siaT_36 | LA5095_01122 | LA5095_03718 | Neu5Ac permease. | Neu5Ac permease. | 0.471 |
siaT_13 | siaT_37 | LA5095_01122 | LA5095_03743 | Neu5Ac permease. | Neu5Ac permease. | 0.470 |
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