Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BAJ49906.1 | BAJ49907.1 | CSUB_C0041 | CSUB_C0042 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.674 |
BAJ49906.1 | BAJ50001.1 | CSUB_C0041 | CSUB_C0138 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.409 |
BAJ49906.1 | BAJ50025.1 | CSUB_C0041 | CSUB_C0162 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.415 |
BAJ49906.1 | BAJ51408.1 | CSUB_C0041 | CSUB_C1557 | Conserved hypothetical protein. | DNA ligase 1; Belongs to the ATP-dependent DNA ligase family. | 0.479 |
BAJ49906.1 | lig | CSUB_C0041 | CSUB_C0907 | Conserved hypothetical protein. | ATP-dependent DNA ligase; DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair. | 0.427 |
BAJ49907.1 | BAJ49906.1 | CSUB_C0042 | CSUB_C0041 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.674 |
BAJ50001.1 | BAJ49906.1 | CSUB_C0138 | CSUB_C0041 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.409 |
BAJ50025.1 | BAJ49906.1 | CSUB_C0162 | CSUB_C0041 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.415 |
BAJ51408.1 | BAJ49906.1 | CSUB_C1557 | CSUB_C0041 | DNA ligase 1; Belongs to the ATP-dependent DNA ligase family. | Conserved hypothetical protein. | 0.479 |
BAJ51408.1 | lig | CSUB_C1557 | CSUB_C0907 | DNA ligase 1; Belongs to the ATP-dependent DNA ligase family. | ATP-dependent DNA ligase; DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair. | 0.915 |
lig | BAJ49906.1 | CSUB_C0907 | CSUB_C0041 | ATP-dependent DNA ligase; DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair. | Conserved hypothetical protein. | 0.427 |
lig | BAJ51408.1 | CSUB_C0907 | CSUB_C1557 | ATP-dependent DNA ligase; DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair. | DNA ligase 1; Belongs to the ATP-dependent DNA ligase family. | 0.915 |