Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BAJ49946.1Iron complex ABC transporter substrate-binding protein. (295 aa)    
Predicted Functional Partners:
BAJ50496.1
Iron ABC transporter ATP-binding protein.
 
 
 0.984
BAJ50497.1
Iron complex ABC transporter permease.
 
 
 0.968
nfo
Deoxyribonuclease IV; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin.
      0.704
BAJ49947.1
Undecaprenyl-diphosphatase.
       0.569
BAJ51270.1
Phosphate ABC transporter substrate-binding protein.
     
 0.426
BAJ50067.1
Iron complex ABC transporter substrate-binding protein.
     
 0.414
BAJ51173.1
Conserved hypothetical protein; Alcohol dehydrogenase GroES domain protein.
 
     0.405
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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