STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAJ49959.1Conserved hypothetical protein; MaoC domain protein dehydratase. (145 aa)    
Predicted Functional Partners:
BAJ50042.1
3-hydroxybutyryl-CoA dehydratase.
  
 0.869
BAJ49958.1
Aminotransferase.
  
 
  0.850
BAJ51491.1
Conserved hypothetical protein.
  
  
 0.779
BAJ50729.1
Biotin operon repressor BirA.
  
  
 0.692
BAJ49960.1
Threonyl/alanyl tRNA synthetase.
     
 0.690
BAJ50234.1
acetyl-CoA C-acyltransferase.
  
 
 0.687
BAJ51186.1
Thiolase.
  
 
 0.687
BAJ51204.1
acetyl-CoA C-acetyltransferase; propanoyl-CoA C-acyltransferase (EC:2.3.1.176).
  
 
 0.687
BAJ51205.1
acetyl-CoA C-acetyltransferase.
  
 
 0.687
BAJ51321.1
acetyl-CoA C-acetyltransferase.
  
 
 0.687
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.