STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAJ49995.16-phosphogluconate dehydrogenase NAD-binding. (299 aa)    
Predicted Functional Partners:
BAJ50091.1
Methylmalonate-semialdehyde dehydrogenase.
 
 
 0.932
BAJ50200.1
Methylmalonate-semialdehyde dehydrogenase.
  
 
 0.932
BAJ50910.1
4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
    
  0.900
BAJ51389.1
acetyl-CoA synthetase.
  
 
 0.836
BAJ49934.1
Pyruvate ferredoxin oxidoreductase, gamma subunit.
    
  0.809
BAJ50599.1
Pyruvate ferredoxin oxidoreductase, delta subunit.
    
  0.809
BAJ49932.1
Pyruvate ferredoxin oxidoreductase, beta subunit.
    
  0.805
BAJ50601.1
Pyruvate ferredoxin oxidoreductase, beta subunit.
    
  0.805
BAJ50598.1
Pyruvate ferredoxin oxidoreductase, gamma subunit.
    
  0.804
BAJ49933.1
Pyruvate ferredoxin oxidoreductase, alpha subunit.
    
  0.803
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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