STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BAJ49995.16-phosphogluconate dehydrogenase NAD-binding. (299 aa)    
Predicted Functional Partners:
BAJ50091.1
Methylmalonate-semialdehyde dehydrogenase.
  
 
 0.929
BAJ50200.1
Methylmalonate-semialdehyde dehydrogenase.
  
 
 0.929
BAJ50910.1
4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
    
  0.900
BAJ51498.1
Citrate synthase.
  
 
 0.853
BAJ51389.1
acetyl-CoA synthetase.
  
 
 0.843
BAJ49935.1
acetyl-CoA synthetase (ADP-forming), alpha and beta subunit.
    
  0.830
BAJ49934.1
Pyruvate ferredoxin oxidoreductase, gamma subunit.
    
  0.810
BAJ50599.1
Pyruvate ferredoxin oxidoreductase, delta subunit.
    
  0.810
BAJ49932.1
Pyruvate ferredoxin oxidoreductase, beta subunit.
    
  0.805
BAJ50601.1
Pyruvate ferredoxin oxidoreductase, beta subunit.
    
  0.805
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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