STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAJ50005.1Cysteine desulfurase / selenocysteine lyase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. (409 aa)    
Predicted Functional Partners:
BAJ49985.1
Nitrogen fixation protein NifU.
 
 
 0.999
BAJ51143.1
Fe-S cluster assembly ATP-binding protein SufC.
  
 0.999
BAJ49956.1
Fe-S cluster assembly protein SufB.
 
 0.990
BAJ51250.1
Fe-S cluster assembly protein SufB.
 
 0.957
BAJ51230.1
Thioredoxin reductase (NADPH).
  
 
 0.919
BAJ51491.1
Conserved hypothetical protein.
 
  
 0.901
BAJ50177.1
Iron-sulfur cluster assembly accessory protein.
  
 
 0.673
BAJ50006.1
threonyl-tRNA synthetase.
       0.655
BAJ49928.1
Molybdenum cofactor biosynthesis protein A.
   
 
 0.619
BAJ51416.1
Carbon monoxide dehydrogenase F protein; Xanthine dehydrogenase accessory factor.
     
 0.490
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.