STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BAJ50027.1Conserved hypothetical protein. (299 aa)    
Predicted Functional Partners:
BAJ50028.1
Molybdopterin-guanine dinucleotide biosynthesis protein B.
 
 
 0.941
ef1b
Elongation factor EF-1 beta subunit; Promotes the exchange of GDP for GTP in EF-1-alpha/GDP, thus allowing the regeneration of EF-1-alpha/GTP that could then be used to form the ternary complex EF-1-alpha/GTP/AAtRNA.
 
     0.804
BAJ49932.1
Pyruvate ferredoxin oxidoreductase, beta subunit.
  
  
 0.553
BAJ50601.1
Pyruvate ferredoxin oxidoreductase, beta subunit.
  
  
 0.553
BAJ51485.1
2-oxoglutarate ferredoxin oxidoreductase subunit beta.
  
  
 0.553
BAJ51042.1
FdhD/NarQ family/nitrate assimilation protein.
 
 
 
 0.502
BAJ51327.1
Ubiquitin-activating enzyme E1-like protein.
 
  
 0.456
BAJ51453.1
Molybdenum cofactor biosynthesis protein E.
  
  
 0.424
BAJ51043.1
Molybdopterin biosynthesis protein MoeA.
  
 
 0.409
BAJ51415.1
Molybdopterin biosynthesis protein MoeA.
  
 
 0.409
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.