STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAJ50028.1Molybdopterin-guanine dinucleotide biosynthesis protein B. (175 aa)    
Predicted Functional Partners:
BAJ50027.1
Conserved hypothetical protein.
 
 
 0.943
BAJ51453.1
Molybdenum cofactor biosynthesis protein E.
  
 
 0.913
BAJ51458.1
Molybdenum cofactor biosynthesis protein C.
  
  
 0.900
BAJ51415.1
Molybdopterin biosynthesis protein MoeA.
 
 
 0.802
ef1b
Elongation factor EF-1 beta subunit; Promotes the exchange of GDP for GTP in EF-1-alpha/GDP, thus allowing the regeneration of EF-1-alpha/GTP that could then be used to form the ternary complex EF-1-alpha/GTP/AAtRNA.
  
    0.795
BAJ51043.1
Molybdopterin biosynthesis protein MoeA.
 
 
 0.788
BAJ51457.1
Molybdenum cofactor biosynthesis protein B.
   
 
 0.748
BAJ51060.1
Hypothetical protein.
  
 
 0.723
BAJ51042.1
FdhD/NarQ family/nitrate assimilation protein.
 
  
 0.680
BAJ51048.1
Formate dehydrogenase alpha subunit.
 
   
 0.657
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.