STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAJ50033.1Conserved hypothetical protein. (485 aa)    
Predicted Functional Partners:
BAJ50034.1
4-hydroxybenzoate octaprenyltransferase.
  
  
 0.811
BAJ50963.1
Anaerobic magnesium-protoporphyrin IX monomethyl ester cyclase.
  
  
 0.711
BAJ51029.1
Fe-S oxidoreductase.
  
  
 0.711
BAJ50032.1
Ubiquinone/menaquinone biosynthesis methyltransferase.
       0.642
BAJ50537.1
Microsomal peptidase.
  
  
 0.489
BAJ50031.1
Hypothetical protein; Transcriptional regulator, TrmB.
       0.469
BAJ51058.1
Electron transfer flavoprotein beta subunit.
  
    0.404
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.