STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAJ50041.1CoA-transferase family III. (400 aa)    
Predicted Functional Partners:
BAJ50042.1
3-hydroxybutyryl-CoA dehydratase.
 
  
 0.825
trpD
Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).
    
 0.809
BAJ50040.1
Cyclase family protein.
  
    0.685
BAJ49959.1
Conserved hypothetical protein; MaoC domain protein dehydratase.
 
 
 0.661
BAJ50039.1
Transcriptional regulator, ArsR family.
       0.564
BAJ50038.1
Hypothetical protein.
       0.563
BAJ51499.1
long-chain-fatty-acid--CoA ligase.
  
  
 0.509
BAJ51395.1
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding.
  
  
 0.469
BAJ51058.1
Electron transfer flavoprotein beta subunit.
   
 
 0.467
BAJ50382.1
propionyl-CoA carboxylase beta chain.
  
 
 0.460
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.