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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAJ50051.1Gylcosyl transferase group 1. (456 aa)    
Predicted Functional Partners:
BAJ50052.1
Small conductance mechanosensitive ion channel, MscS family.
     
 0.775
BAJ50126.1
UDP-glucose 6-dehydrogenase.
 
  
 0.706
BAJ50127.1
Glycosyl transferase family 1.
  
     0.668
BAJ50053.1
Methionyl aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val).
       0.603
BAJ50048.1
UDP-glucose 4-epimerase.
 
  
 0.589
BAJ50134.1
NAD-dependent epimerase/dehydratase.
 
  
 0.586
BAJ50653.1
UDP-glucose 4-epimerase.
 
  
 0.582
BAJ50132.1
Conserved hypothetical protein.
  
     0.533
BAJ51182.1
Dolichol-phosphate mannosyltransferase.
 
 
 0.530
BAJ51350.1
Bifunctional protein GlmU.
 
 
 0.516
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.