Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BAJ50053.1 | BAJ50178.1 | CSUB_C0192 | CSUB_C0317 | Methionyl aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). | DNA-directed RNA polymerase subunit D. | 0.999 |
| BAJ50053.1 | BAJ50333.1 | CSUB_C0192 | CSUB_C0472 | Methionyl aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). | Small subunit ribosomal protein S14. | 0.999 |
| BAJ50053.1 | BAJ50334.1 | CSUB_C0192 | CSUB_C0473 | Methionyl aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). | Small subunit ribosomal protein S8; Belongs to the universal ribosomal protein uS8 family. | 0.999 |
| BAJ50053.1 | rpl14 | CSUB_C0192 | CSUB_C0468 | Methionyl aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). | Large subunit ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | 0.999 |
| BAJ50053.1 | rpl24 | CSUB_C0192 | CSUB_C0469 | Methionyl aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). | Large subunit ribosomal protein L24; Located at the polypeptide exit tunnel on the outside of the subunit. | 0.999 |
| BAJ50053.1 | rpl29 | CSUB_C0192 | CSUB_C0465 | Methionyl aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). | Large subunit ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family. | 0.999 |
| BAJ50053.1 | rpl6 | CSUB_C0192 | CSUB_C0474 | Methionyl aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). | Large subunit ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.999 |
| BAJ50053.1 | rps13 | CSUB_C0192 | CSUB_C0458 | Methionyl aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). | Small subunit ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement; Belongs to the universal ribosomal protein uS13 family. | 0.999 |
| BAJ50053.1 | rps17 | CSUB_C0192 | CSUB_C0467 | Methionyl aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). | Small subunit ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.999 |
| BAJ50053.1 | rps3 | CSUB_C0192 | CSUB_C0464 | Methionyl aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). | Small subunit ribosomal protein S3; Binds the lower part of the 30S subunit head. Belongs to the universal ribosomal protein uS3 family. | 0.999 |
| BAJ50178.1 | BAJ50053.1 | CSUB_C0317 | CSUB_C0192 | DNA-directed RNA polymerase subunit D. | Methionyl aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). | 0.999 |
| BAJ50178.1 | BAJ50333.1 | CSUB_C0317 | CSUB_C0472 | DNA-directed RNA polymerase subunit D. | Small subunit ribosomal protein S14. | 0.999 |
| BAJ50178.1 | BAJ50334.1 | CSUB_C0317 | CSUB_C0473 | DNA-directed RNA polymerase subunit D. | Small subunit ribosomal protein S8; Belongs to the universal ribosomal protein uS8 family. | 0.999 |
| BAJ50178.1 | rpl14 | CSUB_C0317 | CSUB_C0468 | DNA-directed RNA polymerase subunit D. | Large subunit ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | 0.999 |
| BAJ50178.1 | rpl24 | CSUB_C0317 | CSUB_C0469 | DNA-directed RNA polymerase subunit D. | Large subunit ribosomal protein L24; Located at the polypeptide exit tunnel on the outside of the subunit. | 0.999 |
| BAJ50178.1 | rpl29 | CSUB_C0317 | CSUB_C0465 | DNA-directed RNA polymerase subunit D. | Large subunit ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family. | 0.999 |
| BAJ50178.1 | rpl6 | CSUB_C0317 | CSUB_C0474 | DNA-directed RNA polymerase subunit D. | Large subunit ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.999 |
| BAJ50178.1 | rps13 | CSUB_C0317 | CSUB_C0458 | DNA-directed RNA polymerase subunit D. | Small subunit ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement; Belongs to the universal ribosomal protein uS13 family. | 0.999 |
| BAJ50178.1 | rps17 | CSUB_C0317 | CSUB_C0467 | DNA-directed RNA polymerase subunit D. | Small subunit ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.999 |
| BAJ50178.1 | rps3 | CSUB_C0317 | CSUB_C0464 | DNA-directed RNA polymerase subunit D. | Small subunit ribosomal protein S3; Binds the lower part of the 30S subunit head. Belongs to the universal ribosomal protein uS3 family. | 0.999 |
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