STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BAJ50058.13-oxoacyl-[acyl-carrier protein] reductase. (266 aa)    
Predicted Functional Partners:
BAJ50059.1
methylated-DNA-[protein]-cysteine S-methyltransferase.
  
  
 0.570
BAJ49959.1
Conserved hypothetical protein; MaoC domain protein dehydratase.
  
 0.569
BAJ50042.1
3-hydroxybutyryl-CoA dehydratase.
  
 0.553
BAJ50798.1
Metallophosphoesterase involved in DNA repair/DNA repair protein (rad32/mre11).
  
 
 0.522
BAJ50839.1
DNA repair exonuclease.
  
 
 0.522
BAJ51591.1
Acetolactate synthase I/II/III large subunit.
 
 0.515
BAJ50056.1
DNA topoisomerase III.
   
 
 0.514
BAJ50078.1
Short-chain dehydrogenase/reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
    
0.506
BAJ50673.1
Acetolactate synthase I/II/III large subunit.
 
 0.505
BAJ49929.1
Cytochrome b/b6 domain-containing protein.
  
 
 0.501
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.