Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BAJ50058.1 | BAJ50059.1 | CSUB_C0197 | CSUB_C0198 | 3-oxoacyl-[acyl-carrier protein] reductase. | methylated-DNA-[protein]-cysteine S-methyltransferase. | 0.577 |
| BAJ50058.1 | fen | CSUB_C0197 | CSUB_C0799 | 3-oxoacyl-[acyl-carrier protein] reductase. | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Binds the unpaired 3'-DNA end and kinks the DNA to facilitate 5' cleavage specificity. Cleaves one nucleotide into the double-stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair (BER) pathway. A [...] | 0.439 |
| BAJ50059.1 | BAJ50058.1 | CSUB_C0198 | CSUB_C0197 | methylated-DNA-[protein]-cysteine S-methyltransferase. | 3-oxoacyl-[acyl-carrier protein] reductase. | 0.577 |
| BAJ50059.1 | BAJ50175.1 | CSUB_C0198 | CSUB_C0314 | methylated-DNA-[protein]-cysteine S-methyltransferase. | Endonuclease III. | 0.598 |
| BAJ50059.1 | BAJ50185.1 | CSUB_C0198 | CSUB_C0324 | methylated-DNA-[protein]-cysteine S-methyltransferase. | DNA polymerase I. | 0.418 |
| BAJ50059.1 | BAJ50689.1 | CSUB_C0198 | CSUB_C0832 | methylated-DNA-[protein]-cysteine S-methyltransferase. | DNA-3-methyladenine glycosylase; Belongs to the DNA glycosylase MPG family. | 0.464 |
| BAJ50059.1 | BAJ51174.1 | CSUB_C0198 | CSUB_C1323 | methylated-DNA-[protein]-cysteine S-methyltransferase. | UspA domain protein. | 0.655 |
| BAJ50059.1 | BAJ51379.1 | CSUB_C0198 | CSUB_C1528 | methylated-DNA-[protein]-cysteine S-methyltransferase. | Conserved hypothetical protein. | 0.435 |
| BAJ50059.1 | CSUB_C0034 | CSUB_C0198 | CSUB_C0034 | methylated-DNA-[protein]-cysteine S-methyltransferase. | ATPase; Probable gene remnant of transposase. | 0.490 |
| BAJ50059.1 | dbh | CSUB_C0198 | CSUB_C1496 | methylated-DNA-[protein]-cysteine S-methyltransferase. | DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis. | 0.575 |
| BAJ50059.1 | fen | CSUB_C0198 | CSUB_C0799 | methylated-DNA-[protein]-cysteine S-methyltransferase. | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Binds the unpaired 3'-DNA end and kinks the DNA to facilitate 5' cleavage specificity. Cleaves one nucleotide into the double-stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair (BER) pathway. A [...] | 0.516 |
| BAJ50059.1 | nfo | CSUB_C0198 | CSUB_C1167 | methylated-DNA-[protein]-cysteine S-methyltransferase. | Deoxyribonuclease IV; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin. | 0.476 |
| BAJ50175.1 | BAJ50059.1 | CSUB_C0314 | CSUB_C0198 | Endonuclease III. | methylated-DNA-[protein]-cysteine S-methyltransferase. | 0.598 |
| BAJ50175.1 | dbh | CSUB_C0314 | CSUB_C1496 | Endonuclease III. | DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis. | 0.695 |
| BAJ50175.1 | fen | CSUB_C0314 | CSUB_C0799 | Endonuclease III. | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Binds the unpaired 3'-DNA end and kinks the DNA to facilitate 5' cleavage specificity. Cleaves one nucleotide into the double-stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair (BER) pathway. A [...] | 0.786 |
| BAJ50175.1 | nfo | CSUB_C0314 | CSUB_C1167 | Endonuclease III. | Deoxyribonuclease IV; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin. | 0.882 |
| BAJ50185.1 | BAJ50059.1 | CSUB_C0324 | CSUB_C0198 | DNA polymerase I. | methylated-DNA-[protein]-cysteine S-methyltransferase. | 0.418 |
| BAJ50185.1 | dbh | CSUB_C0324 | CSUB_C1496 | DNA polymerase I. | DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis. | 0.866 |
| BAJ50185.1 | fen | CSUB_C0324 | CSUB_C0799 | DNA polymerase I. | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Binds the unpaired 3'-DNA end and kinks the DNA to facilitate 5' cleavage specificity. Cleaves one nucleotide into the double-stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair (BER) pathway. A [...] | 0.882 |
| BAJ50185.1 | nfo | CSUB_C0324 | CSUB_C1167 | DNA polymerase I. | Deoxyribonuclease IV; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin. | 0.446 |
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