STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BAJ50062.1Hypothetical protein. (202 aa)    
Predicted Functional Partners:
BAJ51337.1
Cytochrome c oxidase subunit I; Belongs to the heme-copper respiratory oxidase family.
  
 0.988
BAJ51015.1
Cytochrome c oxidase subunit III.
  
 0.980
BAJ51334.1
NADH dehydrogenase I subunit H.
   
 0.965
BAJ49929.1
Cytochrome b/b6 domain-containing protein.
  
 
 0.962
BAJ51333.1
NADH dehydrogenase I subunit A.
  
 0.958
BAJ51361.1
NADH dehydrogenase I subunit C.
  
 
 0.910
BAJ50456.1
Rieske (2Fe-2S) domain-containing protein.
  
 
 0.894
BAJ51362.1
NADH dehydrogenase I subunit D; Belongs to the complex I 49 kDa subunit family.
   
 
 0.864
BAJ51360.1
NADH dehydrogenase I subunit B; Belongs to the complex I 20 kDa subunit family.
  
 
 0.845
rps7
Small subunit ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center; Belongs to the universal ribosomal protein uS7 family.
  
 
 0.815
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.