Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
BAJ50064.1ABC transporter ATP-binding protein. (370 aa)    
Predicted Functional Partners:
BAJ50066.1
Iron complex ABC transporter permease.
 
 
  0.905
BAJ50067.1
Iron complex ABC transporter substrate-binding protein.
 
  
  0.841
BAJ49982.1
ABC-2 type transport system ATP-binding protein.
 
    
0.735
BAJ50065.1
Conserved hypothetical protein; Sulfonate/nitrate/taurine ABC transporter substrate-binding protein.
 
     0.616
BAJ50990.1
Conserved hypothetical protein.
 
 
    0.577
BAJ50903.1
Spermidine/putrescine ABC transporter permease.
  
 0.523
BAJ51193.1
Branched-chain amino acid ABC transporter permease.
 
      0.461
BAJ50506.1
Maltooligosaccharide ABC transporter ATP-binding protein.
  
  
 
0.422
BAJ50072.1
Sugar ABC transporter ATP-binding protein.
  
  
 
0.416
BAJ50541.1
Maltooligosaccharide ABC transportor ATP-binding protein.
  
  
 
0.416
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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