STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAJ50082.1Multiple sugar ABC transporter substrate-binding protein. (492 aa)    
Predicted Functional Partners:
BAJ50509.1
Multiple sugar ABC transporter permease.
 
 
 0.870
BAJ50074.1
Multiple sugar ABC transporter permease.
 
 
 0.861
BAJ50073.1
Multiple sugar ABC transporter permease.
 
 
 0.856
BAJ50510.1
Multiple sugar ABC transporter permease.
 
 
 0.856
BAJ50525.1
Multiple sugar ABC transporter permease.
 
 
 0.831
BAJ50524.1
Multiple sugar ABC transporter permease.
 
 
 0.821
BAJ50540.1
Multiple sugar ABC transporter permease.
 
 
 0.811
BAJ50539.1
Multiple sugar ABC transporter permease.
 
 
 0.805
BAJ50079.1
Hypothetical protein.
       0.773
BAJ50080.1
Hypothetical protein.
       0.773
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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