STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAJ50091.1Methylmalonate-semialdehyde dehydrogenase. (480 aa)    
Predicted Functional Partners:
BAJ50908.1
Aminotransferase; 4-aminobutyrate transaminase [EC:2.6.1.19]; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 0.950
BAJ51498.1
Citrate synthase.
  
 0.947
BAJ50910.1
4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.939
BAJ49995.1
6-phosphogluconate dehydrogenase NAD-binding.
  
 
 0.929
BAJ51389.1
acetyl-CoA synthetase.
  
 0.925
BAJ49933.1
Pyruvate ferredoxin oxidoreductase, alpha subunit.
   
 0.914
BAJ50600.1
Pyruvate ferredoxin oxidoreductase, alpha subunit.
   
 0.914
BAJ49935.1
acetyl-CoA synthetase (ADP-forming), alpha and beta subunit.
    
 0.913
BAJ50598.1
Pyruvate ferredoxin oxidoreductase, gamma subunit.
    
 0.913
BAJ49932.1
Pyruvate ferredoxin oxidoreductase, beta subunit.
    
 0.907
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.