STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BAJ50104.1Hypothetical protein; Belongs to the peptidase S8 family. (759 aa)    
Predicted Functional Partners:
BAJ50103.1
Ornithine cyclodeaminase.
     
 0.569
BAJ50719.1
Ca2+-transporting ATPase.
  
 
 0.552
BAJ50477.1
Serine protease; Belongs to the peptidase S8 family.
  
     0.520
dnaK
Molecular chaperone DnaK; Acts as a chaperone.
  
 
 0.469
dbh
DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis.
  
 
 0.457
BAJ49895.1
Helicase domain-containing protein; SNF2/Rad54 family.
 
 
 
 0.453
BAJ50608.1
DNA/RNA helicase.
 
 
 
 0.448
BAJ51224.1
Conserved hypothetical protein.
 
 
 
 0.407
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.