Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
BAJ50113.1Conserved hypothetical protein. (286 aa)    
Predicted Functional Partners:
CSUB_C0034
ATPase; Probable gene remnant of transposase.
  
 
 0.935
BAJ51573.1
Cysteine synthase A.
    
 0.926
BAJ49970.1
Threonine dehydratase.
  
 
 0.850
BAJ51032.1
Homoserine dehydrogenase.
    
  0.815
thrB
Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.
     
  0.800
BAJ50111.1
Carboxyltransferase; Belongs to the alpha-IPM synthase/homocitrate synthase family.
  
    0.781
BAJ50110.1
Fumarylacetoacetate hydrolase family protein.
  
    0.773
BAJ50112.1
Pyruvate dehydrogenase E1 component subunit alpha.
       0.773
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
 
 0.680
BAJ50108.1
Ornithine cyclodeaminase.
     
 0.614
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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