STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAJ50124.1Conserved hypothetical protein; DNA polymerase, beta domain protein region. (151 aa)    
Predicted Functional Partners:
BAJ50123.1
Conserved hypothetical protein.
   
   0.807
BAJ50125.1
UTP--glucose-1-phosphate uridylyltransferase.
       0.653
BAJ50126.1
UDP-glucose 6-dehydrogenase.
       0.653
BAJ50127.1
Glycosyl transferase family 1.
       0.643
BAJ50122.1
Conserved hypothetical protein.
       0.536
BAJ50128.1
Conserved hypothetical protein.
       0.507
BAJ50159.1
Hypothetical protein.
   
 
 0.453
BAJ50121.1
Hypothetical protein.
       0.438
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.