STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAJ50132.1Conserved hypothetical protein. (288 aa)    
Predicted Functional Partners:
BAJ50133.1
Glycosyl transferases group 1.
 
     0.748
BAJ50134.1
NAD-dependent epimerase/dehydratase.
 
  
 0.656
BAJ50126.1
UDP-glucose 6-dehydrogenase.
  
  
 0.655
BAJ50127.1
Glycosyl transferase family 1.
  
     0.642
BAJ51182.1
Dolichol-phosphate mannosyltransferase.
 
 
 0.551
BAJ50654.1
Glycosyl transferase family 1.
  
     0.547
BAJ50051.1
Gylcosyl transferase group 1.
  
     0.533
BAJ51077.1
Nucleotidyl transferase.
 
 
 0.491
BAJ50130.1
Conserved hypothetical protein; Methyltransferase domain.
 
  
 0.481
BAJ50653.1
UDP-glucose 4-epimerase.
 
  
 0.456
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.