BAJ50163.1 protein (Caldiarchaeum subterraneum)

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BAJ50163.1

Large subunit ribosomal protein L2. (241 aa)

Predicted Functional Partners:

rps19p

0.999

rpl23

0.999

BAJ50166.1

0.999

rpl22

0.999

rpl14

0.999

rpl5

0.999

rpl18

0.999

rpl4

0.998

rps3

0.998

rpl29

0.998

Your Current Organism:

Caldiarchaeum subterraneum

NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BAJ50163.1	BAJ50166.1	CSUB_C0302	CSUB_C0305	Large subunit ribosomal protein L2.	Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	0.999
BAJ50163.1	rpl14	CSUB_C0302	CSUB_C0468	Large subunit ribosomal protein L2.	Large subunit ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.	0.999
BAJ50163.1	rpl18	CSUB_C0302	CSUB_C0477	Large subunit ribosomal protein L2.	Large subunit ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	0.999
BAJ50163.1	rpl22	CSUB_C0302	CSUB_C0463	Large subunit ribosomal protein L2.	Large subunit ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.	0.999
BAJ50163.1	rpl23	CSUB_C0302	CSUB_C0303	Large subunit ribosomal protein L2.	Large subunit ribosomal protein L23; Binds to 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Belongs to the universal ribosomal protein uL23 family.	0.999
BAJ50163.1	rpl29	CSUB_C0302	CSUB_C0465	Large subunit ribosomal protein L2.	Large subunit ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family.	0.998
BAJ50163.1	rpl4	CSUB_C0302	CSUB_C0304	Large subunit ribosomal protein L2.	Large subunit ribosomal protein L4e; Forms part of the polypeptide exit tunnel.	0.998
BAJ50163.1	rpl5	CSUB_C0302	CSUB_C0471	Large subunit ribosomal protein L2.	Large subunit ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. May contact the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.	0.999
BAJ50163.1	rps19p	CSUB_C0302	CSUB_C0300	Large subunit ribosomal protein L2.	Small subunit ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	0.999
BAJ50163.1	rps3	CSUB_C0302	CSUB_C0464	Large subunit ribosomal protein L2.	Small subunit ribosomal protein S3; Binds the lower part of the 30S subunit head. Belongs to the universal ribosomal protein uS3 family.	0.998
BAJ50166.1	BAJ50163.1	CSUB_C0305	CSUB_C0302	Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	Large subunit ribosomal protein L2.	0.999
BAJ50166.1	rpl14	CSUB_C0305	CSUB_C0468	Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	Large subunit ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.	0.999
BAJ50166.1	rpl18	CSUB_C0305	CSUB_C0477	Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	Large subunit ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	0.999
BAJ50166.1	rpl22	CSUB_C0305	CSUB_C0463	Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	Large subunit ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.	0.999
BAJ50166.1	rpl23	CSUB_C0305	CSUB_C0303	Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	Large subunit ribosomal protein L23; Binds to 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Belongs to the universal ribosomal protein uL23 family.	0.999
BAJ50166.1	rpl29	CSUB_C0305	CSUB_C0465	Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	Large subunit ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family.	0.997
BAJ50166.1	rpl4	CSUB_C0305	CSUB_C0304	Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	Large subunit ribosomal protein L4e; Forms part of the polypeptide exit tunnel.	0.999
BAJ50166.1	rpl5	CSUB_C0305	CSUB_C0471	Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	Large subunit ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. May contact the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.	0.998
BAJ50166.1	rps19p	CSUB_C0305	CSUB_C0300	Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	Small subunit ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	0.997
BAJ50166.1	rps3	CSUB_C0305	CSUB_C0464	Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	Small subunit ribosomal protein S3; Binds the lower part of the 30S subunit head. Belongs to the universal ribosomal protein uS3 family.	0.998