Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BAJ50197.1histidyl-tRNA synthetase. (349 aa)    
Predicted Functional Partners:
BAJ50968.1
ATP phosphoribosyltransferase.
 
 
 0.964
BAJ51403.1
Translation initiation factor eIF-2 alpha subunit.
   
 0.959
BAJ50006.1
threonyl-tRNA synthetase.
 
 
 0.928
leuS
leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
 
 0.906
BAJ50293.1
Translation initiation factor eIF-2 gamma subunit.
 
 0.904
BAJ50163.1
Large subunit ribosomal protein L2.
 
 
 0.902
BAJ51492.1
Valyl tRNA-synthetase.
 
 
 0.896
BAJ51117.1
tyrosyl-tRNA synthetase.
 
 
 0.886
cysS
cysteinyl-tRNA synthetase.
 
 
 0.867
ileS
isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 2 subfamily.
 
  
 0.857
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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