Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
BAJ50212.1Methanol dehydrogenase regulator. (318 aa)    
Predicted Functional Partners:
BAJ50213.1
Hypothetical protein.
  
  
 0.919
BAJ50209.1
Hypothetical protein.
       0.773
BAJ50210.1
Hypothetical protein.
       0.773
BAJ50211.1
Hypothetical protein.
       0.773
BAJ50214.1
Hypothetical protein.
       0.773
BAJ50215.1
Hypothetical protein.
       0.773
fbp
Fructose-1,6-bisphosphatase; Catalyzes two subsequent steps in gluconeogenesis: the aldol condensation of dihydroxyacetone phosphate (DHAP) and glyceraldehyde-3- phosphate (GA3P) to fructose-1,6-bisphosphate (FBP), and the dephosphorylation of FBP to fructose-6-phosphate (F6P).
       0.773
BAJ50761.1
Conserved hypothetical protein; GHMP kinases N terminal domain.
   
    0.686
htpX
Peptidase M48; Heat shock protein HtpX; Belongs to the peptidase M48B family.
  
    0.683
BAJ50207.1
4-hydroxybenzoate octaprenyltransferase.
  
    0.564
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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