STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAJ50228.1NADPH-dependent F420 reductase. (218 aa)    
Predicted Functional Partners:
BAJ50229.1
Phosphomannomutase; Belongs to the phosphohexose mutase family.
       0.774
BAJ50230.1
Conserved hypothetical protein.
       0.773
BAJ50231.1
Conserved hypothetical protein.
       0.773
BAJ50232.1
Hypothetical protein.
       0.773
BAJ51446.1
F420-0:gamma-glutamyl ligase.
 
   
 0.769
BAJ51088.1
LPPG:Fo 2-phospho-L-lactate transferase.
 
   
 0.764
BAJ51089.1
Hypothetical protein.
 
   
 0.665
BAJ50227.1
Hypothetical protein.
       0.545
BAJ50238.1
Coenzyme F420-dependent N5,N10-methenyltetrahydromethanopterin reductase.
 
    0.478
BAJ51424.1
Conserved hypothetical protein; GTPase.
    
 0.468
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.