Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
BAJ50236.1Conserved hypothetical protein; Pyridoxamine 5'-phosphate oxidase-related FMN-binding. (132 aa)    
Predicted Functional Partners:
BAJ50235.1
Conserved hypothetical protein.
 
     0.647
BAJ50234.1
acetyl-CoA C-acyltransferase.
       0.588
BAJ51108.1
V-type H+-transporting ATPase subunit C.
  
     0.549
BAJ51532.1
6-pyruvoyl tetrahydrobiopterin synthase.
  
     0.510
BAJ51590.1
Conserved hypothetical protein.
  
     0.468
BAJ50233.1
Conserved hypothetical protein.
       0.432
BAJ51340.1
Cytochrome AA3 controlling protein.
  
     0.421
BAJ51141.1
Conserved hypothetical protein.
  
     0.416
BAJ50237.1
Conserved hypothetical protein; Amidohydrolase.
       0.410
BAJ50265.1
Conserved hypothetical protein.
  
     0.400
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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