STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAJ50248.1Hypothetical protein. (159 aa)    
Predicted Functional Partners:
BAJ50456.1
Rieske (2Fe-2S) domain-containing protein.
   
 
 0.914
BAJ49929.1
Cytochrome b/b6 domain-containing protein.
   
 
 0.912
BAJ51337.1
Cytochrome c oxidase subunit I; Belongs to the heme-copper respiratory oxidase family.
  
   0.908
BAJ50247.1
F420-dependent N5,N10-methenyltetrahydromethanopterin reductase.
       0.732
BAJ51015.1
Cytochrome c oxidase subunit III.
  
   0.691
BAJ50062.1
Hypothetical protein.
  
   0.673
BAJ51338.1
Cytochrome c oxidase subunit II.
  
   0.673
tuf
Elongation factor EF-1 alpha subunit; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.
       0.584
BAJ50246.1
3-octaprenyl-4-hydroxybenzoate carboxy-lyase.
       0.523
BAJ50244.1
Cobalt/nickel ABC transporter ATP-binding protein.
       0.487
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.