Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
BAJ50252.1ABC-2 type transport system ATP-binding protein. (314 aa)    
Predicted Functional Partners:
BAJ50435.1
Branched-chain amino acid ABC transporter ATP-binding protein.
    
0.909
BAJ50251.1
ABC-2 type transport system permease.
  
 
 0.793
BAJ50253.1
Hypothetical protein.
       0.773
BAJ50489.1
ABC-2 type transport system permease.
 
  
 0.602
BAJ50665.1
ABC-2 type transport system permease.
 
  
 0.591
BAJ50254.1
Aspartate aminotransferase.
     
 0.562
BAJ50255.1
Prephenate dehydrogenase.
       0.555
BAJ50747.1
Sulfate ABC transporter ATP-binding protein.
  
     0.552
BAJ50087.1
ABC-2 type transport system permease.
  
 
 0.528
BAJ51134.1
Peptide/nickel ABC transporter ATP-binding protein.
     
0.521
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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