Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BAJ50283.1Dihydropyrimidinase. (480 aa)    
Predicted Functional Partners:
pyrB
Aspartate carbamoyltransferase catalytic subunit.
  
 
 0.963
BAJ50429.1
Orotidine-5'-phosphate decarboxylase.
  
  
 0.872
BAJ50873.1
Oxidoreductase FAD/NAD(P)-binding subunit.
  
  
 0.841
BAJ50284.1
Conserved hypothetical protein; Memo-like protein; Belongs to the MEMO1 family.
  
    0.789
fni
Isopentenyl-diphosphate delta-isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
  
    0.782
BAJ50285.1
Mevalonate kinase.
       0.773
BAJ50286.1
Acetylglutamate kinase.
       0.773
BAJ50281.1
Molybdenum hydroxylase family protein, small subunit.
  
  
 0.614
BAJ50282.1
Molybdenum hydroxylase family protein, medium subunit.
  
  
 0.613
cysS
cysteinyl-tRNA synthetase.
  
  
 0.493
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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