Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
fniIsopentenyl-diphosphate delta-isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). (358 aa)    
Predicted Functional Partners:
BAJ50286.1
Acetylglutamate kinase.
    
 0.991
BAJ50447.1
Octaprenyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family.
  
 
 0.977
BAJ50285.1
Mevalonate kinase.
 
  
 0.960
BAJ50284.1
Conserved hypothetical protein; Memo-like protein; Belongs to the MEMO1 family.
  
    0.874
BAJ50369.1
3-hydroxy-3-methylglutaryl-CoA reductase; Belongs to the HMG-CoA reductase family.
    
 0.870
BAJ51480.1
Diphosphomevalonate decarboxylase.
 
  
 0.868
BAJ50932.1
Glycolate oxidase.
  
 0.802
BAJ50283.1
Dihydropyrimidinase.
  
    0.782
BAJ50184.1
Small subunit ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.
  
  
 0.771
BAJ49958.1
Aminotransferase.
  
 0.753
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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