Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BAJ50312.1Conserved hypothetical protein. (133 aa)    
Predicted Functional Partners:
BAJ50313.1
Hypothetical protein.
       0.860
BAJ50314.1
Hypothetical protein.
       0.860
BAJ50311.1
Large subunit ribosomal protein L15e.
       0.815
BAJ50315.1
Conserved hypothetical protein; CAAX amino terminal protease family.
       0.773
BAJ51427.1
Conserved hypothetical protein; Putative RNA-associated protein.
     
 0.739
rrp41
Exosome complex component RRP41; Catalytic component of the exosome, which is a complex involved in RNA degradation. Has 3'->5' exoribonuclease activity. Can also synthesize heteropolymeric RNA-tails.
     
 0.739
rrp42
Exosome complex component RRP42; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Contributes to the structuring of the Rrp41 active site.
     
 0.739
BAJ50869.1
Hydrogenase nickel incorporation protein HypA.
  
    0.728
rps3ae
Small subunit ribosomal protein S3Ae; Belongs to the eukaryotic ribosomal protein eS1 family.
       0.700
BAJ51428.1
Exosome complex component RRP4.
       0.700
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.