STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAJ50321.1Methylcobalamin:homocysteine methyltransferase. (315 aa)    
Predicted Functional Partners:
BAJ50320.1
5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase.
 
  
  0.993
ahcY
Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
  
 
 0.968
BAJ51067.1
S-adenosylmethionine synthetase.
  
  
 0.925
BAJ50727.1
methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
    
 0.908
BAJ51032.1
Homoserine dehydrogenase.
  
 
 0.887
BAJ49970.1
Threonine dehydratase.
 
 
 0.872
thrB
Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.
  
 
 0.848
BAJ51573.1
Cysteine synthase A.
  
 
 0.829
BAJ50322.1
Thioredoxin reductase (NADPH).
   
 
 0.802
BAJ50323.1
Phosphate uptake regulator.
       0.727
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.