Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
BAJ50354.1Peptide/nickel ABC transporter permease. (348 aa)    
Predicted Functional Partners:
BAJ50356.1
Peptide/nickel ABC transporter permease.
 0.999
BAJ50355.1
Peptide/nickel ABC transporter ATP-binding protein.
 
 0.998
BAJ51133.1
Peptide/nickel ABC transporter permease.
 
 0.997
BAJ51134.1
Peptide/nickel ABC transporter ATP-binding protein.
 
 0.994
BAJ50348.1
Peptide/nickel ABC transporter ATPase subunit.
 
 0.985
BAJ50352.1
Peptide/nickel ABC transporter substrate-binding protein.
 
  
  0.950
BAJ51131.1
Peptide/nickel ABC transporter substrate-binding protein.
 
  
  0.936
BAJ51132.1
Peptide/nickel ABC transporter permease.
  
  
 
0.907
BAJ51135.1
Peptide/nickel ABC transporter ATP-binding protein.
 
 
 0.862
BAJ50357.1
Hypothetical protein.
       0.705
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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