Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BAJ50361.1FAD dependent oxidoreductase. (392 aa)    
Predicted Functional Partners:
BAJ51279.1
Glycine cleavage system aminomethyltransferase.
 
 
 0.971
BAJ50636.1
FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
  
 
 0.718
BAJ50679.1
FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
  
 
 0.718
fni
Isopentenyl-diphosphate delta-isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
  
 
 0.630
BAJ49958.1
Aminotransferase.
  
 
 0.561
BAJ51105.1
Aminotransferase.
  
 
 0.561
BAJ50360.1
Hypothetical protein.
       0.547
BAJ50527.1
Alanine racemase domain protein.
  
  
 0.530
BAJ50818.1
1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase.
 
 
 0.522
BAJ51072.1
Conserved hypothetical protein.
 
 
 0.504
Your Current Organism:
Caldiarchaeum subterraneum
NCBI taxonomy Id: 311458
Other names: C. Caldiarchaeum subterraneum, Candidatus Caldiarchaeum subterraneum, uncultured crenarchaeote 10-H-08
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