Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BAJ50173.1 | BAJ50375.1 | CSUB_C0312 | CSUB_C0514 | Hypothetical protein. | Conserved hypothetical protein. | 0.454 |
BAJ50173.1 | BAJ50377.1 | CSUB_C0312 | CSUB_C0516 | Hypothetical protein. | Conserved hypothetical protein; Bacterial FdrA protein. | 0.470 |
BAJ50370.1 | BAJ50371.1 | CSUB_C0509 | CSUB_C0510 | Conserved hypothetical protein. | Signal recognition particle receptor. | 0.664 |
BAJ50370.1 | BAJ50375.1 | CSUB_C0509 | CSUB_C0514 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.411 |
BAJ50370.1 | BAJ50376.1 | CSUB_C0509 | CSUB_C0515 | Conserved hypothetical protein. | Cyclase family protein. | 0.403 |
BAJ50370.1 | eif6 | CSUB_C0509 | CSUB_C0512 | Conserved hypothetical protein. | Translation initiation factor eIF-6; Binds to the 50S ribosomal subunit and prevents its association with the 30S ribosomal subunit to form the 70S initiation complex. | 0.577 |
BAJ50370.1 | pfdA | CSUB_C0509 | CSUB_C0511 | Conserved hypothetical protein. | Prefoldin subunit alpha; Molecular chaperone capable of stabilizing a range of proteins. Seems to fulfill an ATP-independent, HSP70-like function in archaeal de novo protein folding. | 0.664 |
BAJ50370.1 | rpl31e | CSUB_C0509 | CSUB_C0513 | Conserved hypothetical protein. | Large subunit ribosomal protein L31e; Belongs to the ribosomal protein L31e family. | 0.569 |
BAJ50371.1 | BAJ50370.1 | CSUB_C0510 | CSUB_C0509 | Signal recognition particle receptor. | Conserved hypothetical protein. | 0.664 |
BAJ50371.1 | BAJ50375.1 | CSUB_C0510 | CSUB_C0514 | Signal recognition particle receptor. | Conserved hypothetical protein. | 0.467 |
BAJ50371.1 | BAJ50376.1 | CSUB_C0510 | CSUB_C0515 | Signal recognition particle receptor. | Cyclase family protein. | 0.461 |
BAJ50371.1 | BAJ50377.1 | CSUB_C0510 | CSUB_C0516 | Signal recognition particle receptor. | Conserved hypothetical protein; Bacterial FdrA protein. | 0.438 |
BAJ50371.1 | eif6 | CSUB_C0510 | CSUB_C0512 | Signal recognition particle receptor. | Translation initiation factor eIF-6; Binds to the 50S ribosomal subunit and prevents its association with the 30S ribosomal subunit to form the 70S initiation complex. | 0.802 |
BAJ50371.1 | pfdA | CSUB_C0510 | CSUB_C0511 | Signal recognition particle receptor. | Prefoldin subunit alpha; Molecular chaperone capable of stabilizing a range of proteins. Seems to fulfill an ATP-independent, HSP70-like function in archaeal de novo protein folding. | 0.845 |
BAJ50371.1 | rpl31e | CSUB_C0510 | CSUB_C0513 | Signal recognition particle receptor. | Large subunit ribosomal protein L31e; Belongs to the ribosomal protein L31e family. | 0.908 |
BAJ50375.1 | BAJ50173.1 | CSUB_C0514 | CSUB_C0312 | Conserved hypothetical protein. | Hypothetical protein. | 0.454 |
BAJ50375.1 | BAJ50370.1 | CSUB_C0514 | CSUB_C0509 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.411 |
BAJ50375.1 | BAJ50371.1 | CSUB_C0514 | CSUB_C0510 | Conserved hypothetical protein. | Signal recognition particle receptor. | 0.467 |
BAJ50375.1 | BAJ50376.1 | CSUB_C0514 | CSUB_C0515 | Conserved hypothetical protein. | Cyclase family protein. | 0.870 |
BAJ50375.1 | BAJ50377.1 | CSUB_C0514 | CSUB_C0516 | Conserved hypothetical protein. | Conserved hypothetical protein; Bacterial FdrA protein. | 0.985 |
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